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23 September 2014 -
Ensembl Regulatory Build Now Available in the Genome Browser
We are pleased to announce that data from the
Ensembl Regulatory Build is now available in the UCSC Genome Browser
as a public track hub for both hg19 and hg38. This track hub contains promoters and their
flanking regions, enhancers, and many other regulatory features predicted across a number
of cell lines using annotated segmentation states. Click
to view this hub on the hg19 assembly, or click
to view it on the hg38 assembly.
We would like to thank our collaborators Daniel Zerbino, Steve Wilder, and Nathan Johnson
from Ensembl and Kate Rosenbloom and Matthew Speir from UCSC for their efforts in
bringing these resources to the UCSC Genome Browser.
04 September 2014 -
New ENCODE portal launched at www.encodeproject.org
The website for up-to-date information about the ENCODE project is no
longer hosted at genome.ucsc.edu/ENCODE.
Those UCSC ENCODE pages now archive information and tools from the ENCODE
production and pilot phases (2003 to 2012) including live links to visualize and download data.
Please navigate to the new ENCODE portal for recent data releases. Along with the ability to use
faceted searching to explore all ENCODE data, the ENCODE portal provides visualization
in the UCSC Genome Browser via a "Visualize Data" link on assay pages when
processed data files are available.
03 September 2014 -
Data from the FaceBase Consortium Now Available in the Genome Browser:
We are pleased to announce that much of the data from the FaceBase Consortium is now available in the UCSC Genome Browser as a public track hub.
30 July 2014 -
New Rat (rn6) Assembly Now Available in the Genome Browser:
We are excited to announce the release of a Genome Browser for the July 2014 assembly
of rat, Rattus norvegicus (RGSC Rnor_6.0, UCSC version rn6).