# On branch master # Your branch is ahead of 'origin/master' by 4 commits. # # Changed but not updated: # (use "git add/rm ..." to update what will be committed) # (use "git checkout -- ..." to discard changes in working directory) # # modified: ../python/style.txt # modified: hg/hgTables/mainPage.c # deleted: hg/oneShot/testCvToSql/foo.c # modified: hg/oneShot/testCvToSql/testCvToSql.c # # Untracked files: # (use "git add ..." to include in what will be committed) # # ../clean.log # ../compile.log # ../diff # ../foo2 # ../pull # ../python/.styleCommentsJk.txt.swp # ../python/ENV/ # ../python/idioms.txt # ../python/users/kent/ # ai/wordChain/996 # ai/wordChain/donQuixote.chain # ai/wordChain/donQuixote.non # ai/wordChain/donQuixote.txt # ai/wordChain/foo.chain # ai/wordChain/foo.nonsense # ai/wordChain/jumbled.txt # ai/wordChain/nonsense # ai/wordChain/pull # ai/wordChain/questions # ai/wordChain/quixote.chain # ai/wordChain/short.txt # blat/mCrea.geno.rc # diff # diffs # foo2 # hg/autoDtd/test/chado/out.atree # hg/autoDtd/test/chado/out.dtd # hg/autoDtd/test/chado/out.stats # hg/autoDtd/test/chado/out.tree # hg/autoDtd/test/hotnews/out.atree # hg/autoDtd/test/hotnews/out.dtd # hg/autoDtd/test/hotnews/out.stats # hg/autoDtd/test/hotnews/out.tree # hg/autoDtd/test/shapes/out.atree # hg/autoDtd/test/shapes/out.dtd # hg/autoDtd/test/shapes/out.stats # hg/autoDtd/test/shapes/out.tree # hg/autoSql/out/ # hg/autoSql/status # hg/autoXml/test/dasGff/out/ # hg/autoXml/test/polygon/out/ # hg/checkTableCoords/tests/1 # hg/diffs # hg/encode/encodeMergeReplicates/foo1 # hg/encode/encodeMergeReplicates/merged.narrowPeak # hg/encode/encodeMergeReplicates/out # hg/encode/encodeMergeReplicates/outRep1Rep2Add.narrowPeak # hg/encode/encodeMergeReplicates/outRep1Rep2AddAddMin.narrowPeak # hg/encode/encodeMergeReplicates/outRep1Rep2Agree.narrowPeak # hg/encode/encodeMergeReplicates/outRep1Rep2Default.narrowPeak # hg/encode/encodeMergeReplicates/outRep1Rep2Threshold10.narrowPeak # hg/encode/encodeMergeReplicatesBatch/doHud.sh # hg/encode/encodeMergeReplicatesBatch/hud.ra # hg/encode/encodeMergeReplicatesBatch/hudOut.ra # hg/encode/encodeMergeReplicatesBatch/inDir # hg/encode/encodeMergeReplicatesBatch/out.ra # hg/encode/encodeMergeReplicatesBatch/out.sh # hg/encode/encodeMergeReplicatesBatch/snyder.ra # hg/encode/encodeMergeReplicatesBatch/status # hg/hgGene/status # hg/hgGene/tags # hg/hgHubConnect/status # hg/hgTables/all.joiner # hg/hgTables/hgTablesTest.log # hg/hgTables/status # hg/hgTables/tags # hg/hgTablesTest/log # hg/hgTrackUi/coo # hg/hgTrackUi/status # hg/hgTracks/bam.ra # hg/hgTracks/blame # hg/hgTracks/cart.ra # hg/hgTracks/diff # hg/hgTracks/full # hg/hgTracks/gilt.out # hg/hgTracks/hgt/ # hg/hgTracks/hgtIdeo/ # hg/hgTracks/output.ps # hg/hgTracks/pull # hg/hgTracks/status # hg/hgTracks/tags # hg/hgTracks/track.ra # hg/hgTracks/track2.ra # hg/hgTracks/track3.ra # hg/hgc/status # hg/hgc/tags # hg/inc/omiciaUi.h # hg/inc/oregannoOther.h # hg/lib/blame # hg/lib/cart.new # hg/lib/diff # hg/lib/omiciaUi.c # hg/lib/oregannoOther.as # hg/lib/oregannoOther.c # hg/lib/oregannoOther.sql # hg/lib/pull # hg/lib/push # hg/lib/status # hg/logCrawl/encodeUserDbCrawl/foo2 # hg/logCrawl/encodeUserDbCrawl/foo3 # hg/logCrawl/encodeUserDbCrawl/foo4 # hg/logCrawl/encodeUserDbCrawl/goo3 # hg/logCrawl/encodeUserDbCrawl/out # hg/makeDb/doc/foo1 # hg/makeDb/doc/hg18.old # hg/makeDb/doc/log # hg/makeDb/doc/status # hg/makeDb/genbank/bin/ # hg/makeDb/genbank/lib/ # hg/makeDb/genbank/src/lib/py/genbank/Config.pyc # hg/makeDb/genbank/src/lib/py/genbank/GbIndex.pyc # hg/makeDb/genbank/src/lib/py/genbank/GenomePartition.pyc # hg/makeDb/genbank/src/lib/py/genbank/GenomeSeqs.pyc # hg/makeDb/genbank/src/lib/py/genbank/TsvReader.pyc # hg/makeDb/genbank/src/lib/py/genbank/__init__.pyc # hg/makeDb/genbank/src/lib/py/genbank/fileOps.pyc # hg/makeDb/genbank/src/lib/py/genbank/procOps.pyc # hg/makeDb/schema/foo.joiner # hg/makeDb/schema/joinTwoInfo/hgFixed.snoop # hg/makeDb/schema/joinTwoInfo/snoop # hg/makeDb/schema/sp090821.snoop # hg/makeDb/schema/sp100331.snoop # hg/makeDb/schema/sp101005.snoop # hg/makeDb/schema/status # hg/makeDb/schema/uniProt.snoop # hg/makeDb/trackDb/allRas # hg/makeDb/trackDb/foo.ra # hg/makeDb/trackDb/human/hg18/myTrackDb.ra # hg/makeDb/trackDb/human/hg19/foo2.ra # hg/makeDb/trackDb/human/hg19/jkExperiments.ra # hg/makeDb/trackDb/status # hg/merge # hg/oneShot/cartSim/cartSim.log # hg/oneShot/cartSim/jorgesDbs/ # hg/oneShot/cartSim/longInnoDb1/ # hg/oneShot/cartSim/longRun1/ # hg/oneShot/cartSim/longRun2/ # hg/oneShot/cartSim/longRun3/ # hg/oneShot/cartSim/notes # hg/oneShot/cartSimNoInsert/cartFreen.log # hg/oneShot/freen/foo.col # hg/oneShot/freen/foo1 # hg/oneShot/freen/foo2 # hg/oneShot/freen/good.out # hg/oneShot/freen/hg18.tracks # hg/oneShot/freen/test.html # hg/oneShot/freen/test.ra # hg/oneShot/testCvToSql/backup/ # hg/oneShot/testCvToSql/cv.as # hg/oneShot/testCvToSql/cv.atree # hg/oneShot/testCvToSql/cv.ra # hg/oneShot/testCvToSql/cv.stats # hg/oneShot/testCvToSql/doIt # hg/oneShot/testCvToSql/literal/ # hg/oneShot/testCvToSql/makefile # hg/oneShot/testCvToSql/old.atree # hg/oneShot/testCvToSql/out # hg/oneShot/testCvToSql/pull # hg/oneShot/testCvToSql/raTagNames # hg/oneShot/testCvToSql/tableDescriptions.tab # hg/oneShot/testCvToSql/testCvToSql.out # hg/oneShot/tryNewColorOverlay/rna.lst # hg/oneShot/wgEncodeRegGenRa/status # hg/oneShot/wgEncodeRegTfbsDedupeHelp/ # hg/protein/spToDb/spToDb.myVersion.c # hg/regulate/companion/hive # hg/regulate/companion/regCompanion5C/foo.out # hg/regulate/companion/regCompanion5C/test.bed # hg/regulate/companion/regCompanion5C/test.download # hg/regulate/companion/regCompanionChia/50kPromEnhanceViaChia.notes # hg/regulate/companion/regCompanionChia/50kPromEnhanceViaChia.tab # hg/regulate/companion/regCompanionChia/chia3enh3pro.tab # hg/regulate/companion/regCompanionChia/chia3pro3pro.tab # hg/regulate/companion/regCompanionChia/chiaPetK562SameChrom.tab # hg/regulate/companion/regCompanionChia/chiaPetK562SameChromSepBlocks.bed # hg/regulate/companion/regCompanionChia/chiaPromOtherEnd.bed # hg/regulate/companion/regCompanionChia/chiaPromOtherEnd.tab # hg/regulate/companion/regCompanionChia/chiaSamChromK562Exons.bed # hg/regulate/companion/regCompanionChia/chiaSameChromK562.bed # hg/regulate/companion/regCompanionChia/enhStringentGm12878.bed # hg/regulate/companion/regCompanionChia/enhStringentK562.bed # hg/regulate/companion/regCompanionChia/foo2 # hg/regulate/companion/regCompanionChia/foo3 # hg/regulate/companion/regCompanionChia/foo4 # hg/regulate/companion/regCompanionChia/foo5 # hg/regulate/companion/regCompanionChia/foo6 # hg/regulate/companion/regCompanionChia/foo7 # hg/regulate/companion/regCompanionChia/foofoo # hg/regulate/companion/regCompanionChia/gm12878Ctcf.bed # hg/regulate/companion/regCompanionChia/oneEnd.lst # hg/regulate/companion/regCompanionChia/oneEnd.tab # hg/regulate/companion/regCompanionChia/other.bed # hg/regulate/companion/regCompanionChia/other.lst # hg/regulate/companion/regCompanionChia/promoters.bed # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/1.tab # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/1shuf.tab # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/2-7.tab # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/2-8.tab # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/actToAct.tab # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/actToAct90.tab # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/actToPermuted.tab # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/activeEnh.bed # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/activeEnh.lst # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/activeEnh.tab # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/activeEnhToProm.tab # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/activeGene.bed # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/activeGene.lst # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/activeGene.tab # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/bed.tab # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/ctcfInterference.tab # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/enh.bed # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/enhToProm.bed # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/enhToProm.tab # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/enhToProm100k.tab # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/enhToProm10k.tab # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/foo.tab # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/outBad # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/outGood # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/permute707.tab # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/permute90.tab # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/permuted.tab # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/permutedGene.lst # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/permutedGene.tab # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/permutedOut.tab # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/pro.bed # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/r90Lengths.tab # hg/regulate/companion/regCompanionCorrelateEnhancerAndExpression/rc # hg/regulate/companion/regCompanionCtcfInterference/ # hg/regulate/companion/regCompanionGraphVsFixedPoints/Gm12878.lst # hg/regulate/companion/regCompanionGraphVsFixedPoints/GmPhylo.lst # hg/regulate/companion/regCompanionGraphVsFixedPoints/H1hesc.lst # hg/regulate/companion/regCompanionGraphVsFixedPoints/K562.lst # hg/regulate/companion/regCompanionGraphVsFixedPoints/canonical/ # hg/regulate/companion/regCompanionGraphVsFixedPoints/chromHmm/ # hg/regulate/companion/regCompanionGraphVsFixedPoints/corEnhGm12878.tab # hg/regulate/companion/regCompanionGraphVsFixedPoints/corEnhStrandedGm12878.tab # hg/regulate/companion/regCompanionGraphVsFixedPoints/ctcf/ # hg/regulate/companion/regCompanionGraphVsFixedPoints/enh/ # hg/regulate/companion/regCompanionGraphVsFixedPoints/enh2/ # hg/regulate/companion/regCompanionGraphVsFixedPoints/ez/ # hg/regulate/companion/regCompanionGraphVsFixedPoints/firstCodingSplice/ # hg/regulate/companion/regCompanionGraphVsFixedPoints/gmEnh/ # hg/regulate/companion/regCompanionGraphVsFixedPoints/oldOne.tab # hg/regulate/companion/regCompanionGraphVsFixedPoints/one.lst # hg/regulate/companion/regCompanionGraphVsFixedPoints/one.tab # hg/regulate/companion/regCompanionGraphVsFixedPoints/p300/ # hg/regulate/companion/regCompanionGraphVsFixedPoints/phyloP.lst # hg/regulate/companion/regCompanionGraphVsFixedPoints/regPeaks/ # hg/regulate/companion/regCompanionGraphVsFixedPoints/run2/ # hg/regulate/companion/regCompanionGraphVsFixedPoints/secondCodingSplice/ # hg/regulate/companion/regCompanionGraphVsFixedPoints/short.lst # hg/regulate/companion/regCompanionGraphVsFixedPoints/stringent3/ # hg/regulate/companion/regCompanionGraphVsFixedPoints/stringent4/ # hg/regulate/companion/regCompanionGraphVsFixedPoints/stringent5/ # hg/regulate/companion/regCompanionGraphVsFixedPoints/stringent6/ # hg/regulate/companion/regCompanionGraphVsFixedPoints/take2.err # hg/regulate/companion/regCompanionGraphVsFixedPoints/tier1.lst # hg/regulate/companion/regCompanionGraphVsFixedPoints/tier1Txn.lst # hg/regulate/companion/regCompanionGraphVsFixedPoints/toR.csh # hg/regulate/companion/regCompanionHistoneBox/bedToTabR.csh # hg/regulate/companion/regCompanionHistoneBox/gm12878Dnase.bed # hg/regulate/companion/regCompanionHistoneBox/gm12878Dnase.fat # hg/regulate/companion/regCompanionHistoneBox/gm12878Dnase.tab # hg/regulate/companion/regCompanionHistoneBox/gm12878DnaseH3k27acBox.bed # hg/regulate/companion/regCompanionHistoneBox/gm12878DnaseH3k27acBox.fat # hg/regulate/companion/regCompanionHistoneBox/gm12878DnaseH3k27acBox.narrowPeak # hg/regulate/companion/regCompanionHistoneBox/gm12878DnaseH3k27acBox.tab # hg/regulate/companion/regCompanionHistoneBox/gm12878DnaseH3k4me1Box.bed # hg/regulate/companion/regCompanionHistoneBox/gm12878DnaseH3k4me1Box.fat # hg/regulate/companion/regCompanionHistoneBox/gm12878DnaseH3k4me1Box.narrowPeak # hg/regulate/companion/regCompanionHistoneBox/gm12878DnaseH3k4me1Box.tab # hg/regulate/companion/regCompanionHistoneBox/gm12878DnaseH3k4me1Box30.bed # hg/regulate/companion/regCompanionHistoneBox/gm12878DnaseH3k4me1Box30.fat # hg/regulate/companion/regCompanionHistoneBox/gm12878DnaseH3k4me1Box30.narrowPeak # hg/regulate/companion/regCompanionHistoneBox/gm12878DnaseH3k4me1Box30.tab # hg/regulate/companion/regCompanionHistoneBox/gm12878DnaseH3k4me3Box50.bed # hg/regulate/companion/regCompanionHistoneBox/gm12878DnaseH3k4me3Box50.fat # hg/regulate/companion/regCompanionHistoneBox/gm12878DnaseH3k4me3Box50.narrowPeak # hg/regulate/companion/regCompanionHistoneBox/gm12878DnaseH3k4me3Box50.tab # hg/regulate/companion/regCompanionHistoneBox/gm12878DnaseTop50.bed # hg/regulate/companion/regCompanionHistoneBox/gm12878DnaseTop50.fat # hg/regulate/companion/regCompanionHistoneBox/gm12878DnaseTop50.tab # hg/regulate/companion/regCompanionPickEnhancers/examplesByHand.txt # hg/regulate/companion/regCompanionPickEnhancers/foo.csh # hg/regulate/companion/regCompanionPickEnhancers/hsmm.csh # hg/regulate/companion/regCompanionPickEnhancers/loose.csh # hg/regulate/companion/regCompanionPickEnhancers/nhek.csh # hg/regulate/companion/regCompanionPickEnhancers/nhekDnaseChr1.narrowPeak # hg/regulate/companion/regCompanionPickEnhancers/oldOut.tab # hg/regulate/companion/regCompanionPickEnhancers/out.tab # hg/regulate/companion/regCompanionPickEnhancers/pickedBeds/ # hg/regulate/companion/regCompanionPickEnhancers/std20.tab # hg/regulate/companion/regCompanionPickEnhancers/std25.tab # hg/regulate/companion/regCompanionPickEnhancers/std30.tab # hg/regulate/companion/regCompanionPickEnhancers/stringent.csh # hg/regulate/companion/regCompanionPickEnhancers/stringent.tab # hg/regulate/companion/regCompanionPickEnhancers/stringent2.csh # hg/regulate/companion/regCompanionPickEnhancers/stringent2/ # hg/regulate/companion/regCompanionPickEnhancers/stringent3.csh # hg/regulate/companion/regCompanionPickEnhancers/stringent3/ # hg/regulate/companion/regCompanionPickEnhancers/stringent4.csh # hg/regulate/companion/regCompanionPickEnhancers/stringent4/ # hg/regulate/companion/regCompanionPickEnhancers/stringent5.csh # hg/regulate/companion/regCompanionPickEnhancers/stringent5/ # hg/regulate/companion/regCompanionPickEnhancers/stringent6/ # hg/regulate/companion/regCompanionPickEnhancers/subsetH1hesc.narrowPeak # hg/regulate/companion/regCompanionPickEnhancers/take1/ # hg/regulate/companion/regCompanionPickEnhancers/take2/ # hg/regulate/companion/regCompanionPickEnhancers/take3/ # hg/regulate/companion/regCompanionPickEnhancers/take4/ # hg/regulate/companion/regCompanionPickEnhancers/take5/ # hg/regulate/companion/regCompanionSquishGraph/ # hg/regulate/companion/regCompanionTopPeaks/ # hg/regulate/log # hg/regulate/regBeadPos/.readBeadPos.doc.swp # hg/regulate/regBeadPos/bak/ # hg/regulate/regBeadPos/dnaseSize.tab # hg/regulate/regBeadPos/firstGenomeRun.csh # hg/regulate/regBeadPos/firstGenomeRun.in # hg/regulate/regBeadPos/foo.bed # hg/regulate/regBeadPos/foo2 # hg/regulate/regBeadPos/fullDnase.bw # hg/regulate/regBeadPos/fullH3k27ac.bw # hg/regulate/regBeadPos/fullH3k4me1.bw # hg/regulate/regBeadPos/histSize.tab # hg/regulate/regBeadPos/peak.bed # hg/regulate/regBeadPos/regBeads.narrowPeak # hg/regulate/regBeadPos/run2.bed # hg/regulate/regBeadPos/run2.csh # hg/regulate/regBeadPos/run2.in # hg/regulate/regBeadPos/run2.narrowPeak # hg/regulate/regBeadPos/stateProbes.cur # hg/regulate/regBeadPos/stateProbs.txt # hg/regulate/regBeadPos/test2.in # hg/regulate/regBeadPos/testAc.bw # hg/regulate/regBeadPos/testDnase.bw # hg/regulate/regCluster/diff # hg/regulate/regCluster/status # hg/regulate/regCluster/tests/needBreak/out.bed # hg/regulate/regCluster/tests/needBreak/out.cluster # hg/regulate/regClusterAttachMetadataToTableOfTables/filtered.bed # hg/regulate/regClusterBedExpCfg/hud/ # hg/regulate/regClusterBedExpCfg/in.ra # hg/regulate/regClusterBedExpCfg/in.tab # hg/regulate/regClusterBedExpCfg/out.bed # hg/regulate/regClusterBedExpCfg/out.cfg # hg/regulate/regClusterBedExpCfg/out.exps # hg/regulate/regClusterBedExpCfg/yale # hg/regulate/regClusterTreeCells/clusterInput.lst # hg/regulate/regClusterTreeCells/foo2 # hg/regulate/regClusterTreeCells/matrix # hg/regulate/regClusterTreeCells/status # hg/regulate/regClusterTreeCells/test2.lst # hg/regulate/regClusterTreeCells/tests/in2/ # hg/regulate/regClusterTreeCells/tests/out.tree # hg/regulate/regClusterTreeCells/uwAffy.lst # hg/regulate/regStartSampleEmbl/.extra.embl.swp # hg/regulate/regStartSampleEmbl/extra.embl # hg/regulate/regStartSampleEmbl/foo2.embl # hg/regulate/status # hg/status # hg/trash/ # hg/txGene/txGeneAccession/txLastId # hg/utils/bedRandom/5000.bed # hg/utils/bedRandom/5000masked.bed # hg/utils/bedRandom/5000maskedGc.tab # hg/utils/bedRandom/chrom.sizes # hg/utils/bedRandom/foo.bed # hg/utils/bedRandom/rmsk.bed # hg/utils/hubCheck/status # hg/utils/hubCheck/udc/ # hg/utils/makeTrackIndex/foo2 # hg/utils/mdbQuery/log # hg/utils/mdbQuery/status # hgFiles # kehayden/alphaChain/#alphaChain.c# # kehayden/alphaChain/DYZ3_alphaChain.out # kehayden/alphaChain/DYZ3_alphaChain.out2 # kehayden/alphaChain/DYZ3_alphaChain.out3 # kehayden/alphaChain/DYZ3_alphaChain.txt # kehayden/alphaChain/alphaChain.jk.works # kehayden/alphaChain/backup/ # kehayden/alphaChain/textOUT # kehayden/alphaChain/textOUT2 # lib/diff # lib/diffs # lib/x86_64/stXXXX0Bjo48 # log # merge # oneShot/rgbaGfxTest/9 # oneShot/status # oneShot/testGitRename/blame # oneShot/testGitRename/status # oneShot/testGitRename/test.out # oneShot/testGitRename/testGitRename.blame # oneShot/testGitRename/upperFile.blame # parasol/bin/ # pull # sourceFiles # status # tdb # tee # utils/bedCommonRegions/status # utils/bedCommonRegions/tests/inOver/ # utils/bedCommonRegions/tests/out.bed # utils/bedGeneParts/firstCodingSplice.out # utils/bedGeneParts/firstExon.out # utils/bedGeneParts/foo2 # utils/bedGeneParts/introns.out # utils/bedGeneParts/promoter.out # utils/bedGeneParts/ugly.out # utils/bedRemoveOverlap/status # utils/bedToClosestPoint/enhK562.bed # utils/bedToClosestPoint/makefile # utils/bedToClosestPoint/promo.bed # utils/bedToClosestPoint/refSeq.bed # utils/bedToClosestPoint/testOne.bed # utils/bigWigAverageOverBed/bad.bed # utils/bigWigAverageOverBed/bad.out # utils/bigWigAverageOverBed/big.bed # utils/bigWigAverageOverBed/big.out # utils/bigWigAverageOverBed/bigBlock.out # utils/bigWigAverageOverBed/bigChrom.out # utils/bigWigAverageOverBed/block.out # utils/bigWigAverageOverBed/chr22.bed # utils/bigWigAverageOverBed/chrom.out # utils/bigWigAverageOverBed/dupe.bed # utils/bigWigAverageOverBed/foo1 # utils/bigWigAverageOverBed/foo2 # utils/bigWigAverageOverBed/phylop.bw # utils/bigWigAverageOverBed/phylop_1.ave # utils/bigWigAverageOverBed/phylop_2.ave # utils/bigWigAverageOverBed/phylop_3.ave # utils/bigWigAverageOverBed/phylop_4.ave # utils/bigWigAverageOverBed/rna1.bw # utils/bigWigAverageOverBed/rna1_1.ave # utils/bigWigAverageOverBed/rna1_2.ave # utils/bigWigAverageOverBed/rna1_3.ave # utils/bigWigAverageOverBed/test.bed # utils/bigWigAverageOverBed/test.out # utils/bigWigAverageOverBed/timeNotes # utils/bigWigAverageOverBed/ucscGenes.out # utils/bigWigMerge/18m.bw # utils/bigWigMerge/18p.bw # utils/bigWigMerge/19m.bw # utils/bigWigMerge/19p.bw # utils/colTransform/test.in # utils/colTransform/test.out # utils/compareIds/ # utils/faToTwoBit/tests/output/ # utils/linesInAllFiles/in1.txt # utils/linesInAllFiles/in2.txt # utils/linesInAllFiles/in3.txt # utils/pslLiftSubrangeBlat/tests/output/ # utils/status # utils/wigToBigWig/dupTest1.wig # utils/wigToBigWig/dupTest2.wig # utils/wigToBigWig/dupTest3.wig # utils/wigToBigWig/foo.bigWig # utils/wigToBigWig/quickCheckWig.pl # ../status # ../tags.log # ../test.log # ../throughputNotest.txt no changes added to commit (use "git add" and/or "git commit -a")